Schunck, Florian
Florian Schunck is a researcher dedicated to understanding the ecological consequences of chemical stressors. During his doctoral work at the Helmholtz Centre for Environmental Research in Leipzig, Florian investigated the impact of pesticides on Daphnia magna, spanning individual physiology to community-level responses. He developed strong expertise in Bayesian parameter inference, Dynamic Energy Budget (DEB) modelling, and Python-based data analysis. Outside the lab, Florian enjoys playing Ultimate Frisbee. Now, as a Postdoc at the University of Osnabrück, Florian applies his experimental background and toxicokinetic-toxicodynamic (TKTD) modelling skills to explore chemical impacts on pollinators within the PollinERA project. He is actively developing methods for incorporating omics data into mechanistic TKTD frameworks to enhance predictive power, and he is a passionate advocate of version control and automated testing in software development.
Education | |
2019–2023 Dr. rer. nat. | Helmholtz Centre for Environmental Research GmbH — UFZ, Leipzig, RWTH Aachen, Germany Topic: Experimental and Theoretical Aquatic Toxicology |
2016–2019 Master of Science | Martin-Luther-University Halle-Wittenberg Management of natural Resources, Focus on Soil Science, Hydrology and Ecological Modelling. |
2012–2016 Bachelor of Science | Brandenburg University of Technology (BTU) Cottbus-Senftenberg, Germany & Universidad de Buenos Aires, Argentina Environmental and Resource Management, Focus on fresh water and soil systems |
Work Experience | |
09/2023–today Postdoc | Researcher in the Group of Environmental Systems Modelling, Institute of Mathematics, Osnabrück University. Molecular TKTD Modelling; Development of the Multi-Exposure TKTD Model for pollinators in the Horizon Europe Project PollinERA; Development of the pymob and mempyguts research software |
05/2023–08/2023 Research Exchange | Research Stay at Jülich Research Centre in the group of Modeling and Simulation. Research exchange grant of the Helmholtz Information and Data Science Academy (HIDA). Implementation of Bayesian optimization and inference algorithms in the open source chromatography modeling software CADET.
|
Research Interests
- Pesticide Impacts on Pollinators: Investigating the ecological consequences of chemical stressors, specifically pesticides, on pollinator populations.
- TKTD Modeling: Developing and applying mechanistic TKTD frameworks to understand the processes governing chemical exposure and biological response.
- Omics Data Integration: Actively developing methods to incorporate omics data (e.g., genomics, proteomics) into TKTD models to enhance predictive capabilities.
- Bayesian Parameter Inference: Combining ODE models with Bayesian parameter inference and hierarchical modelling schemes using modern probabilistic programming languages such as numpyro and pymc
- pymob: Developing the python modelling building framework (pymob) to handle complex multi-dimensional, multi-variate parameter estimation problems
Peer reviewed publications
Bürger LU, Schunck F, Focks A. 2025. Combined Modeling of Multiple Exposure Routes for Terrestrial Arthropods Using the Toxicokinetic–Toxicodynamic BufferGUTS Model. Environ Sci Technol. acs.est.5c03925. doi: 10.1021/acs.est.5c03925
Schunck F et al. 2024. Integrating Time-Resolved nrf2 Gene-Expression Data into a Full GUTS Model as a Proxy for Toxicodynamic Damage in Zebrafish Embryo. Environ Sci Technol. acs.est.4c06267. Doi: 10.1021/acs.est.4c06267
Schunck F et al. 2024. A Dynamic Network Model of Societal Complexity and Resilience Inspired by Tainter’s Theory of Collapse. Entropy. 26(2). doi: 10.3390/e26020098.
Schunck F, Liess M. 2024. Ultra-low esfenvalerate exposure may disrupt interspecific competition. Sci. Total Enviro. doi: 10.1016/j.scitotenv.2023.167455
Schunck F, Liess M. 2023. Ultra-low Esfenvalerate concentrations increase biomass and may reduce competitiveness of Daphnia magna populations. Sci Total Environ. 163916. doi:10.1016/j.scitotenv.2023.163916.
Schunck F, Liess M. 2022. Time between Sequential Exposures to Multiple Stress Turns Antagonism into Synergism. Environ. Sci. Technol. doi:10.1021/acs.est.2c04345.
Klotzbücher A, Schunck F, ..., Mikutta R. 2020. Goethite-Bound Phosphorus in an Acidic Subsoil Is Not Available to Beech (Fagus sylvatica L.). Front. For. Glob. Change. 3(94). doi:10.3389/ffgc.2020.00094.
Non peer-reviewed publications
Schunck F, Busch W, Focks A. 2025. Hierarchical Approaches for Integrating Sparse, Multivariate Toxicological Effect Data in Whole Organism Molecular Dynamics. Biorxiv. doi: 10.1101/2025.05.09.652942
Schunck F. 2025. Pymob. https://github.com/flo-schu/pymob/
Schunck F. 2024. Facing reality: Survival modelling with missing and censored observations with numpyro. Research Blog: Samples from the imaginary world. Link.
Dr. Florian Schunck
Institut für Mathematik
Barbarastr. 12
49076 Osnabrück
Raum: 66/E05
Tel: +49 541 969-3413
Homepage: https://schunck-online.com
florian.schunck@uni-osnabrueck.de